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Esyt1 extended synaptotagmin 1 [ Octodon degus (degu) ]

Gene ID: 101593185, updated on 8-Mar-2024

Summary

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Gene symbol
Esyt1
Gene description
extended synaptotagmin 1
See related
Ensembl:ENSODEG00000007684
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524863.1 (859508..874926, complement)

NW_004524863.1Genomic Context describing neighboring genes Neighboring gene myosin light chain 6 Neighboring gene myosin light chain 6B Neighboring gene zinc finger CCCH-type containing 10 Neighboring gene uncharacterized LOC111814289

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524863 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables lipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in endoplasmic reticulum-plasma membrane tethering IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in lipid transport IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
extended synaptotagmin-1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524863.1 Reference OctDeg1.0 Primary Assembly

    Range
    859508..874926 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004647078.2 → XP_004647135.1  extended synaptotagmin-1

    UniProtKB/TrEMBL
    A0A6P3FHA2
    Related
    ENSODEP00000010282.1, ENSODET00000010431.1
    Conserved Domains (4) summary
    cd04030
    Location:973 → 1098
    C2C_KIAA1228; C2 domain third repeat present in uncharacterized human KIAA1228-like proteins
    cd04050
    Location:483 → 587
    C2B_Synaptotagmin-like; C2 domain second repeat present in Synaptotagmin-like proteins
    cd08391
    Location:652 → 770
    C2A_C2C_Synaptotagmin_like; C2 domain first and third repeat in Synaptotagmin-like proteins
    pfam17047
    Location:139 → 317
    SMP_LBD; Synaptotagmin-like mitochondrial-lipid-binding domain
Nucleotide Protein
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Gene LinkOut

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