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Map1a microtubule associated protein 1A [ Octodon degus (degu) ]

Gene ID: 101588919, updated on 8-Mar-2024

Summary

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Gene symbol
Map1a
Gene description
microtubule associated protein 1A
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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See Map1a in Genome Data Viewer
Location:
chromosome: Un
Exon count:
8
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524578.1 (25661268..25680905, complement)

NW_004524578.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC111815641 Neighboring gene diphosphoinositol pentakisphosphate kinase 1 Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene tumor protein p53 binding protein 1 Neighboring gene U6atac minor spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524578 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables actin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables microtubule binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in axonogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in dendrite development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of microtubule depolymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytosol IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in dendrite IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of microtubule associated complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
microtubule-associated protein 1A

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524578.1 Reference OctDeg1.0 Primary Assembly

    Range
    25661268..25680905 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023711086.1 → XP_023566854.1  microtubule-associated protein 1A isoform X1

    UniProtKB/TrEMBL
    A0A6P6E3G7
    Conserved Domains (2) summary
    cl26464
    Location:2056 → 2731
    Atrophin-1; Atrophin-1 family
    cl26511
    Location:1560 → 1946
    Neuromodulin_N; Gap junction protein N-terminal region

  2. XM_023711089.1 → XP_023566857.1  microtubule-associated protein 1A isoform X2

    UniProtKB/TrEMBL
    A0A6P6E3W8
    Conserved Domains (2) summary
    cl26464
    Location:1818 → 2493
    Atrophin-1; Atrophin-1 family
    cl26511
    Location:1322 → 1708
    Neuromodulin_N; Gap junction protein N-terminal region
Nucleotide Protein
Heading Accession and Version

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