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Arhgef39 Rho guanine nucleotide exchange factor 39 [ Octodon degus (degu) ]

Gene ID: 101588741, updated on 8-Mar-2024

Summary

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Gene symbol
Arhgef39
Gene description
Rho guanine nucleotide exchange factor 39
See related
Ensembl:ENSODEG00000015083
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524621.1 (10865693..10881512)

NW_004524621.1Genomic Context describing neighboring genes Neighboring gene talin 1 Neighboring gene spindle and kinetochore-associated protein 2-like Neighboring gene tropomyosin 2 Neighboring gene carbonic anhydrase 9 Neighboring gene coiled-coil domain containing 107 Neighboring gene signaling threshold regulating transmembrane adaptor 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524621 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables guanyl-nucleotide exchange factor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
rho guanine nucleotide exchange factor 39

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524621.1 Reference OctDeg1.0 Primary Assembly

    Range
    10865693..10881512
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023715965.1 → XP_023571733.1  rho guanine nucleotide exchange factor 39

    UniProtKB/TrEMBL
    A0A6P6EI47
    Conserved Domains (2) summary
    smart00233
    Location:228 → 331
    PH; Pleckstrin homology domain
    pfam00621
    Location:27 → 194
    RhoGEF; RhoGEF domain

  2. XM_004631991.2 → XP_004632048.1  rho guanine nucleotide exchange factor 39

    UniProtKB/TrEMBL
    A0A6P6EI47
    Related
    ENSODEP00000020446.1, ENSODET00000020700.1
    Conserved Domains (2) summary
    smart00233
    Location:228 → 331
    PH; Pleckstrin homology domain
    pfam00621
    Location:27 → 194
    RhoGEF; RhoGEF domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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