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Trib2 tribbles pseudokinase 2 [ Octodon degus (degu) ]

Gene ID: 101586590, updated on 8-Mar-2024

Summary

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Gene symbol
Trib2
Gene description
tribbles pseudokinase 2
See related
Ensembl:ENSODEG00000003153
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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See Trib2 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524727.1 (2854088..2881197)

NW_004524727.1Genomic Context describing neighboring genes Neighboring gene lipin 1 Neighboring gene U2 spliceosomal RNA Neighboring gene uncharacterized LOC111812907 Neighboring gene U1 spliceosomal RNA Neighboring gene heat shock cognate 71 kDa protein pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524727 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mitogen-activated protein kinase kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of MAP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tribbles homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524727.1 Reference OctDeg1.0 Primary Assembly

    Range
    2854088..2881197
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023702395.1 → XP_023558163.1  tribbles homolog 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P6DEW3
    Conserved Domains (1) summary
    cl21453
    Location:1 → 172
    PKc_like; Protein Kinases, catalytic domain

  2. XM_004642331.2 → XP_004642388.1  tribbles homolog 2 isoform X1

    See identical proteins and their annotated locations for XP_004642388.1

    UniProtKB/TrEMBL
    A0A6P6DDH4
    Conserved Domains (1) summary
    cd14022
    Location:67 → 308
    PK_TRB2; Pseudokinase domain of Tribbles Homolog 2

  3. XM_023702394.1 → XP_023558162.1  tribbles homolog 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P6DDH4
    Related
    ENSODEP00000004136.1, ENSODET00000004215.1
    Conserved Domains (1) summary
    cd14022
    Location:67 → 308
    PK_TRB2; Pseudokinase domain of Tribbles Homolog 2
Nucleotide Protein
Heading Accession and Version

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