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Mrpl1 mitochondrial ribosomal protein L1 [ Octodon degus (degu) ]

Gene ID: 101578989, updated on 8-Mar-2024

Summary

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Gene symbol
Mrpl1
Gene description
mitochondrial ribosomal protein L1
See related
Ensembl:ENSODEG00000004206
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524744.1 (578841..708446)

NW_004524744.1Genomic Context describing neighboring genes Neighboring gene heterogeneous nuclear ribonucleoprotein D-like pseudogene Neighboring gene CCR4-NOT transcription complex subunit 6 like Neighboring gene uncharacterized LOC111813157 Neighboring gene selenoprotein K-like Neighboring gene U6 spliceosomal RNA Neighboring gene intraflagellar transport protein 81 homolog pseudogene Neighboring gene Fraser extracellular matrix complex subunit 1 Neighboring gene proline-rich nuclear receptor coactivator 2-like

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524744 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of ribosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of large ribosomal subunit IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
39S ribosomal protein L1, mitochondrial

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524744.1 Reference OctDeg1.0 Primary Assembly

    Range
    578841..708446
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023703306.1 → XP_023559074.1  39S ribosomal protein L1, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A6P6DG84
    Related
    ENSODEP00000005570.1, ENSODET00000005669.1
    Conserved Domains (1) summary
    cl00322
    Location:98 → 241
    Ribosomal_L1; Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that binds ...

  2. XM_023703309.1 → XP_023559077.1  39S ribosomal protein L1, mitochondrial isoform X3

    UniProtKB/TrEMBL
    A0A6P6DG50
    Conserved Domains (1) summary
    cl00322
    Location:98 → 241
    Ribosomal_L1; Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that binds ...

  3. XM_023703310.1 → XP_023559078.1  39S ribosomal protein L1, mitochondrial isoform X4

    UniProtKB/TrEMBL
    A0A6P6DHE1
    Conserved Domains (1) summary
    cl00322
    Location:98 → 241
    Ribosomal_L1; Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that binds ...

  4. XM_023703308.1 → XP_023559076.1  39S ribosomal protein L1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P6DGD8
    Conserved Domains (1) summary
    cl00322
    Location:73 → 216
    Ribosomal_L1; Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that binds ...

  5. XM_023703307.1 → XP_023559075.1  39S ribosomal protein L1, mitochondrial isoform X2

    UniProtKB/TrEMBL
    A0A6P6DGD8
    Conserved Domains (1) summary
    cl00322
    Location:73 → 216
    Ribosomal_L1; Ribosomal protein L1. The L1 protein, located near the E-site of the ribosome, forms part of the L1 stalk along with 23S rRNA. In bacteria and archaea, L1 functions both as a ribosomal protein that binds rRNA, and as a translation repressor that binds ...
Nucleotide Protein
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