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LOC101578619 tubulin beta-3 chain [ Octodon degus (degu) ]

Gene ID: 101578619, updated on 22-Oct-2023

Summary

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Gene symbol
LOC101578619
Gene description
tubulin beta-3 chain
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Also known as
Tubb3
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524791.1 (2198255..2210043, complement)

NW_004524791.1Genomic Context describing neighboring genes Neighboring gene AFG3-like protein 1 Neighboring gene differentially expressed in FDCP 8 homolog Neighboring gene transcription factor 25 Neighboring gene spire type actin nucleation factor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524791 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables G protein-coupled receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables GTPase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables structural constituent of cytoskeleton IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in G protein-coupled receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in microtubule cytoskeleton organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in mitotic cell cycle IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in microtubule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tubulin beta-3 chain
Names
tubulin beta 3 class III

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524791.1 Reference OctDeg1.0 Primary Assembly

    Range
    2198255..2210043 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023705205.1 → XP_023560973.1  tubulin beta-3 chain

    UniProtKB/TrEMBL
    A0A6P6DMR9
    Conserved Domains (2) summary
    PLN00220
    Location:435 → 881
    PLN00220; tubulin beta chain; Provisional
    cd15351
    Location:88 → 358
    7tmA_MC1R; melanocortin receptor subtype 1, member of the class A family of seven-transmembrane G protein-coupled receptors
Nucleotide Protein
Heading Accession and Version

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