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Cyfip2 cytoplasmic FMR1 interacting protein 2 [ Octodon degus (degu) ]

Gene ID: 101578615, updated on 8-Mar-2024

Summary

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Gene symbol
Cyfip2
Gene description
cytoplasmic FMR1 interacting protein 2
See related
Ensembl:ENSODEG00000009223
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
31
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524605.1 (13277691..13417376)

NW_004524605.1Genomic Context describing neighboring genes Neighboring gene golgi associated RAB2 interactor family member 3 Neighboring gene IL2 inducible T cell kinase Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene peroxisomal membrane protein PMP34-like Neighboring gene fibronectin type III domain containing 9 Neighboring gene dnaJ homolog subfamily B member 6-like Neighboring gene NIPA like domain containing 4

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524605 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables small GTPase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in activation of cysteine-type endopeptidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in apoptotic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in axon guidance IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell morphogenesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cell projection assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of actin filament polymerization IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
cytoplasmic FMR1-interacting protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524605.1 Reference OctDeg1.0 Primary Assembly

    Range
    13277691..13417376
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023713088.1 → XP_023568856.1  cytoplasmic FMR1-interacting protein 2 isoform X1

    UniProtKB/TrEMBL
    A0A6P6E9H3
    Conserved Domains (2) summary
    pfam05994
    Location:448 → 1281
    FragX_IP; Cytoplasmic Fragile-X interacting family
    pfam07159
    Location:125 → 327
    DUF1394; Protein of unknown function (DUF1394)

  2. XM_004629394.3 → XP_004629451.1  cytoplasmic FMR1-interacting protein 2 isoform X2

    UniProtKB/TrEMBL
    A0A6P3F4R5
    Related
    ENSODEP00000012431.1, ENSODET00000012600.1
    Conserved Domains (2) summary
    pfam05994
    Location:388 → 1221
    FragX_IP; Cytoplasmic Fragile-X interacting family
    pfam07159
    Location:65 → 267
    DUF1394; Protein of unknown function (DUF1394)
Nucleotide Protein
Heading Accession and Version

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