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Trib1 tribbles pseudokinase 1 [ Octodon degus (degu) ]

Gene ID: 101576369, updated on 8-Mar-2024

Summary

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Gene symbol
Trib1
Gene description
tribbles pseudokinase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
3
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524638.1 (7459582..7467576, complement)

NW_004524638.1Genomic Context describing neighboring genes Neighboring gene 14-3-3 protein zeta/delta-like Neighboring gene biogenesis of lysosome-related organelles complex 1 subunit 2-like Neighboring gene NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase Neighboring gene T-complex protein 1 subunit beta-like Neighboring gene glutaredoxin-2, mitochondrial pseudogene Neighboring gene WASH complex subunit 5

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524638 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables mitogen-activated protein kinase kinase binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of MAP kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
tribbles homolog 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524638.1 Reference OctDeg1.0 Primary Assembly

    Range
    7459582..7467576 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004634420.2 → XP_004634477.1  tribbles homolog 1

    UniProtKB/TrEMBL
    A0A6P3F8S8
    Conserved Domains (2) summary
    smart00220
    Location:105 → 338
    S_TKc; Serine/Threonine protein kinases, catalytic domain
    cd14023
    Location:97 → 338
    PK_TRB1; Pseudokinase domain of Tribbles Homolog 1
Nucleotide Protein
Heading Accession and Version

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