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Chrna7 cholinergic receptor nicotinic alpha 7 subunit [ Octodon degus (degu) ]

Gene ID: 101567659, updated on 8-Mar-2024

Summary

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Gene symbol
Chrna7
Gene description
cholinergic receptor nicotinic alpha 7 subunit
See related
Ensembl:ENSODEG00000013998
Gene type
protein coding
RefSeq status
INFERRED
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524578.1 (1402672..1516816, complement)

NW_004524578.1Genomic Context describing neighboring genes Neighboring gene MAGE family member L2 Neighboring gene makorin ring finger protein 3 Neighboring gene U6 spliceosomal RNA Neighboring gene OTU deubiquitinase 7A

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524578 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables acetylcholine-gated monoatomic cation-selective channel activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables transmembrane signaling receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in monoatomic ion transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in nervous system process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of membrane potential IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in neuron projection IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in postsynaptic membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synapse IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
neuronal acetylcholine receptor subunit alpha-7
Names
cholinergic receptor, nicotinic, alpha polypeptide 7
neuronal acetylcholine receptor subunit alpha-7-like

NCBI Reference Sequences (RefSeq)

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RefSeqs maintained independently of Annotated Genomes

These reference sequences exist independently of genome builds. Explain

These reference sequences are curated independently of the genome annotation cycle, so their versions may not match the RefSeq versions in the current genome build. Identify version mismatches by comparing the version of the RefSeq in this section to the one reported in Genomic regions, transcripts, and products above.

mRNA and Protein(s)

  1. NM_001323272.1 → NP_001310201.1  neuronal acetylcholine receptor subunit alpha-7 precursor

    Status: INFERRED

    Source sequence(s)
    AJSA01003979, AJSA01003980, AJSA01003982
    UniProtKB/TrEMBL
    A0A6P9FR34
    Related
    ENSODEP00000018982.1, ENSODET00000019222.1
    Conserved Domains (3) summary
    TIGR00860
    Location:4 → 490
    LIC; Cation transporter family protein
    pfam02931
    Location:26 → 230
    Neur_chan_LBD; Neurotransmitter-gated ion-channel ligand binding domain
    pfam02932
    Location:237 → 486
    Neur_chan_memb; Neurotransmitter-gated ion-channel transmembrane region

RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524578.1 Reference OctDeg1.0 Primary Assembly

    Range
    1402672..1516816 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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