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Ptgr1 prostaglandin reductase 1 [ Octodon degus (degu) ]

Gene ID: 101567615, updated on 8-Mar-2024

Summary

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Gene symbol
Ptgr1
Gene description
prostaglandin reductase 1
See related
Ensembl:ENSODEG00000000176
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524873.1 (1554858..1581405)

NW_004524873.1Genomic Context describing neighboring genes Neighboring gene cell division control protein 42 homolog pseudogene Neighboring gene G protein subunit gamma 10 Neighboring gene dnaJ homolog subfamily C member 25 Neighboring gene U6 spliceosomal RNA Neighboring gene U6 spliceosomal RNA Neighboring gene zinc finger protein 483 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524873 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 15-oxoprostaglandin 13-oxidase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables 2-alkenal reductase [NAD(P)+] activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in prostaglandin metabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prostaglandin reductase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524873.1 Reference OctDeg1.0 Primary Assembly

    Range
    1554858..1581405
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004647266.2 → XP_004647323.1  prostaglandin reductase 1

    UniProtKB/TrEMBL
    A0A6P6DTJ0
    Conserved Domains (1) summary
    cl25577
    Location:4 → 328
    PKS_ER; Enoylreductase

  2. XM_023707542.1 → XP_023563310.1  prostaglandin reductase 1

    UniProtKB/TrEMBL
    A0A6P6DTJ0
    Related
    ENSODEP00000000201.1, ENSODET00000000213.1
    Conserved Domains (1) summary
    cl25577
    Location:4 → 328
    PKS_ER; Enoylreductase
Nucleotide Protein
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