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Lpxn leupaxin [ Octodon degus (degu) ]

Gene ID: 101566938, updated on 8-Mar-2024

Summary

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Gene symbol
Lpxn
Gene description
leupaxin
See related
Ensembl:ENSODEG00000013002
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
9
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524815.1 (2664696..2705292, complement)

NW_004524815.1Genomic Context describing neighboring genes Neighboring gene olfactory receptor 5B12-like Neighboring gene olfactory receptor 1444 Neighboring gene la-related protein 1B-like Neighboring gene ZFP91 zinc finger protein, atypical E3 ubiquitin ligase Neighboring gene ciliary neurotrophic factor

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524815 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endothelial cell migration IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in negative regulation of B cell receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in substrate adhesion-dependent cell spreading IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in transforming growth factor beta receptor signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
leupaxin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524815.1 Reference OctDeg1.0 Primary Assembly

    Range
    2664696..2705292 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004645782.2 → XP_004645839.1  leupaxin

    UniProtKB/TrEMBL
    A0A6P3FUP6
    Related
    ENSODEP00000017629.1, ENSODET00000017853.1
    Conserved Domains (3) summary
    cd09339
    Location:329 → 380
    LIM4_Paxillin_like; The fourth LIM domain of the Paxillin-like protein family
    cd09408
    Location:211 → 262
    LIM2_Leupaxin; The second LIM domain of Leupaxin
    cl02475
    Location:150 → 204
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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