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Gpatch8 G-patch domain containing 8 [ Octodon degus (degu) ]

Gene ID: 101563411, updated on 8-Mar-2024

Summary

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Gene symbol
Gpatch8
Gene description
G-patch domain containing 8
Gene type
protein coding
RefSeq status
MODEL
Organism
Octodon degus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Hystricomorpha; Octodontidae; Octodon
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
102 current OctDeg1.0 (GCF_000260255.1) Unplaced Scaffold NW_004524632.1 (11984993..12048143, complement)

NW_004524632.1Genomic Context describing neighboring genes Neighboring gene family with sequence similarity 171 member A2 Neighboring gene integrin subunit alpha 2b Neighboring gene transmembrane protein 91 pseudogene Neighboring gene histone-binding protein RBBP4 pseudogene Neighboring gene U6 snRNA-associated Sm-like protein LSm4 Neighboring gene 40S ribosomal protein S2 pseudogene Neighboring gene frizzled class receptor 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004524632 Unplaced Scaffold Reference OctDeg1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
G patch domain-containing protein 8

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Octodon degus Annotation Release 102 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference OctDeg1.0 Primary Assembly

Genomic

  1. NW_004524632.1 Reference OctDeg1.0 Primary Assembly

    Range
    11984993..12048143 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_023718197.1 → XP_023573965.1  G patch domain-containing protein 8

    UniProtKB/TrEMBL
    A0A6P6EPM5
    Conserved Domains (2) summary
    pfam12171
    Location:58 → 85
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    cl25732
    Location:13 → 129
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_023718199.1 → XP_023573967.1  G patch domain-containing protein 8

    UniProtKB/TrEMBL
    A0A6P6EPM5
    Conserved Domains (2) summary
    pfam12171
    Location:58 → 85
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    cl25732
    Location:13 → 129
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_023718198.1 → XP_023573966.1  G patch domain-containing protein 8

    UniProtKB/TrEMBL
    A0A6P6EPM5
    Conserved Domains (2) summary
    pfam12171
    Location:58 → 85
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    cl25732
    Location:13 → 129
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_004633828.2 → XP_004633885.1  G patch domain-containing protein 8

    UniProtKB/TrEMBL
    A0A6P6EPM5
    Conserved Domains (2) summary
    pfam12171
    Location:58 → 85
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    cl25732
    Location:13 → 129
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_023718200.1 → XP_023573968.1  G patch domain-containing protein 8

    UniProtKB/TrEMBL
    A0A6P6EPM5
    Conserved Domains (2) summary
    pfam12171
    Location:58 → 85
    zf-C2H2_jaz; Zinc-finger double-stranded RNA-binding
    cl25732
    Location:13 → 129
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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