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AMPH amphiphysin [ Sorex araneus (European shrew) ]

Gene ID: 101557872, updated on 8-Mar-2024

Summary

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Gene symbol
AMPH
Gene description
amphiphysin
See related
EnsemblRapid:ENSSARG00000013232
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
22
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 1 NC_073302.1 (353480218..353722071, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545879.1 (20747213..20989331, complement)

Chromosome 1 - NC_073302.1Genomic Context describing neighboring genes Neighboring gene T cell receptor gamma variable 8-like Neighboring gene T cell receptor gamma variable 8-like Neighboring gene transfer RNA lysine (anticodon CUU) Neighboring gene histone H3.3A-like Neighboring gene U6 spliceosomal RNA Neighboring gene VPS41 subunit of HOPS complex Neighboring gene POU domain, class 6, transcription factor 2 Neighboring gene U6 spliceosomal RNA

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables phospholipid binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in plasma membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in synaptic vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
amphiphysin

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073302.1 Reference mSorAra2.pri

    Range
    353480218..353722071 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055147158.1 → XP_055003133.1  amphiphysin isoform X5

    Related
    ENSSARP00000029456.1, ENSSART00000040264.1

  2. XM_055147157.1 → XP_055003132.1  amphiphysin isoform X4

    Related
    ENSSARP00000023495.1, ENSSART00000020626.1

  3. XM_055147155.1 → XP_055003130.1  amphiphysin isoform X3

    Related
    ENSSARP00000011949.2, ENSSART00000013236.2

  4. XM_055147151.1 → XP_055003126.1  amphiphysin isoform X2

  5. XM_055147150.1 → XP_055003125.1  amphiphysin isoform X1

    Related
    ENSSARP00000038120.1, ENSSART00000045888.1
Nucleotide Protein
Heading Accession and Version

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