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STAMBPL1 STAM binding protein like 1 [ Sorex araneus (European shrew) ]

Gene ID: 101557149, updated on 8-Mar-2024

Summary

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Gene symbol
STAMBPL1
Gene description
STAM binding protein like 1
See related
EnsemblRapid:ENSSARG00000005705
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 11
Exon count:
12
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 11 NC_073312.1 (50567434..50619672, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545882.1 (18299308..18323865, complement)

Chromosome 11 - NC_073312.1Genomic Context describing neighboring genes Neighboring gene cholesterol 25-hydroxylase Neighboring gene small nucleolar RNA SNORA53 Neighboring gene actin alpha 2, smooth muscle Neighboring gene ankyrin repeat domain 22 Neighboring gene small nucleolar RNA SNORA70 Neighboring gene lipase family member M

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables K63-linked deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables metal-dependent deubiquitinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein K63-linked deubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
AMSH-like protease

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073312.1 Reference mSorAra2.pri

    Range
    50567434..50619672 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055119625.1 → XP_054975600.1  AMSH-like protease isoform X2

    Related
    ENSSARP00000026056.1, ENSSART00000020581.1

  2. XM_055119624.1 → XP_054975599.1  AMSH-like protease isoform X1

    Related
    ENSSARP00000040054.1, ENSSART00000032795.1

  3. XM_004607495.3 → XP_004607552.2  AMSH-like protease isoform X1

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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