U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TMEM17 transmembrane protein 17 [ Sorex araneus (European shrew) ]

Gene ID: 101556440, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TMEM17
Gene description
transmembrane protein 17
See related
EnsemblRapid:ENSSARG00000021160
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See TMEM17 in Genome Data Viewer
Location:
chromosome: X
Exon count:
5
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) X NC_073313.1 (325403339..325411344, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545891.1 (10437785..10444172)

Chromosome X - NC_073313.1Genomic Context describing neighboring genes Neighboring gene copper metabolism domain containing 1 Neighboring gene small nucleolar RNA U3 Neighboring gene UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 2 Neighboring gene EH domain binding protein 1 Neighboring gene orthodenticle homeobox 1

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in non-motile cilium assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in ciliary transition zone IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
transmembrane protein 17

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073313.1 Reference mSorAra2.pri

    Range
    325403339..325411344 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055122200.1 → XP_054978175.1  transmembrane protein 17 isoform X2

  2. XM_004609194.2 → XP_004609251.1  transmembrane protein 17 isoform X1

    Related
    ENSSARP00000022587.1, ENSSART00000029636.1
    Conserved Domains (1) summary
    pfam09799
    Location:49 → 152
    Transmemb_17; Predicted membrane protein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.