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CTDSP1 CTD small phosphatase 1 [ Sorex araneus (European shrew) ]

Gene ID: 101553457, updated on 8-Mar-2024

Summary

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Gene symbol
CTDSP1
Gene description
CTD small phosphatase 1
See related
EnsemblRapid:ENSSARG00000026414
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
8
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) X NC_073313.1 (251342689..251350123)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545959.1 (6247798..6252277, complement)

Chromosome X - NC_073313.1Genomic Context describing neighboring genes Neighboring gene ciliogenesis associated TTC17 interacting protein Neighboring gene solute carrier family 11 member 1 Neighboring gene villin 1 Neighboring gene ubiquitin specific peptidase 37

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA polymerase II CTD heptapeptide repeat phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073313.1 Reference mSorAra2.pri

    Range
    251342689..251350123
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004617141.2 → XP_004617198.1  carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X1

    Related
    ENSSARP00000034440.1, ENSSART00000031903.1
    Conserved Domains (2) summary
    COG5190
    Location:78 → 253
    FCP1; TFIIF-interacting CTD phosphatase, includes NLI-interacting factor [Transcription]
    TIGR02251
    Location:89 → 248
    HIF-SF_euk; Dullard-like phosphatase domain

  2. XM_004617142.2 → XP_004617199.1  carboxy-terminal domain RNA polymerase II polypeptide A small phosphatase 1 isoform X2

    Related
    ENSSARP00000020465.1, ENSSART00000034704.1
    Conserved Domains (2) summary
    COG5190
    Location:77 → 252
    FCP1; TFIIF-interacting CTD phosphatase, includes NLI-interacting factor [Transcription]
    TIGR02251
    Location:88 → 247
    HIF-SF_euk; Dullard-like phosphatase domain
Nucleotide Protein
Heading Accession and Version

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