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ARNT2 aryl hydrocarbon receptor nuclear translocator 2 [ Sorex araneus (European shrew) ]

Gene ID: 101550019, updated on 8-Mar-2024

Summary

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Gene symbol
ARNT2
Gene description
aryl hydrocarbon receptor nuclear translocator 2
See related
EnsemblRapid:ENSSARG00000012144
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
20
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 6 NC_073307.1 (60386956..60415222, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545962.1 (5508826..5530081, complement)

Chromosome 6 - NC_073307.1Genomic Context describing neighboring genes Neighboring gene cell migration inducing hyaluronidase 1 Neighboring gene abhydrolase domain containing 17C, depalmitoylase Neighboring gene cortexin domain containing 1 Neighboring gene fumarylacetoacetate hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aryl hydrocarbon receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aryl hydrocarbon receptor nuclear translocator 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073307.1 Reference mSorAra2.pri

    Range
    60386956..60415222 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055141873.1 → XP_054997848.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X3

  2. XM_055141871.1 → XP_054997846.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X1

    Related
    ENSSARP00000010959.2, ENSSART00000012139.2

  3. XM_055141872.1 → XP_054997847.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X2

  4. XM_055141874.1 → XP_054997849.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X4

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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