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GALNT3 polypeptide N-acetylgalactosaminyltransferase 3 [ Sorex araneus (European shrew) ]

Gene ID: 101549508, updated on 8-Mar-2024

Summary

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Gene symbol
GALNT3
Gene description
polypeptide N-acetylgalactosaminyltransferase 3
See related
EnsemblRapid:ENSSARG00000002157
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) X NC_073313.1 (199857767..199969694, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545858.1 (910939..962556, complement)

Chromosome X - NC_073313.1Genomic Context describing neighboring genes Neighboring gene sodium channel protein type 2 subunit alpha Neighboring gene cysteine and serine rich nuclear protein 3 Neighboring gene U2 spliceosomal RNA Neighboring gene tetratricopeptide repeat domain 21B Neighboring gene sodium voltage-gated channel alpha subunit 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in Golgi apparatus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
polypeptide N-acetylgalactosaminyltransferase 3
Names
UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 3 (GalNAc-T3)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073313.1 Reference mSorAra2.pri

    Range
    199857767..199969694 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055123404.1 → XP_054979379.1  polypeptide N-acetylgalactosaminyltransferase 3

  2. XM_055123403.1 → XP_054979378.1  polypeptide N-acetylgalactosaminyltransferase 3

  3. XM_004601122.2 → XP_004601179.1  polypeptide N-acetylgalactosaminyltransferase 3

    Related
    ENSSARP00000001959.2, ENSSART00000002157.2
    Conserved Domains (4) summary
    cd02510
    Location:188 → 493
    pp-GalNAc-T; pp-GalNAc-T initiates the formation of mucin-type O-linked glycans
    COG0463
    Location:184 → 403
    WcaA; Glycosyltransferase involved in cell wall bisynthesis [Cell wall/membrane/envelope biogenesis]
    cd00161
    Location:507 → 629
    RICIN; Ricin-type beta-trefoil; Carbohydrate-binding domain formed from presumed gene triplication. The domain is found in a variety of molecules serving diverse functions such as enzymatic activity, inhibitory toxicity and signal transduction. Highly specific ...
    pfam00652
    Location:506 → 627
    Ricin_B_lectin; Ricin-type beta-trefoil lectin domain

RNA

  1. XR_008627445.1 RNA Sequence

Nucleotide Protein
Heading Accession and Version

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