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PSMC6 proteasome 26S subunit, ATPase 6 [ Sorex araneus (European shrew) ]

Gene ID: 101538687, updated on 8-Mar-2024

Summary

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Gene symbol
PSMC6
Gene description
proteasome 26S subunit, ATPase 6
See related
EnsemblRapid:ENSSARG00000002578
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
14
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) 3 NC_073304.1 (47054300..47076821, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545859.1 (37604992..37627462)

Chromosome 3 - NC_073304.1Genomic Context describing neighboring genes Neighboring gene translation initiation factor IF-2-like Neighboring gene glucosamine-phosphate N-acetyltransferase 1 Neighboring gene serine/threonine/tyrosine interacting protein Neighboring gene small nucleolar RNA U13 Neighboring gene endoplasmic reticulum oxidoreductase 1 alpha Neighboring gene G protein-coupled receptor 137C

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables proteasome-activating activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of RNA polymerase II transcription preinitiation complex assembly IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of cytosolic proteasome complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of proteasome regulatory particle, base subcomplex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
26S proteasome regulatory subunit 10B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073304.1 Reference mSorAra2.pri

    Range
    47054300..47076821 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004601743.3 → XP_004601800.1  26S proteasome regulatory subunit 10B

    See identical proteins and their annotated locations for XP_004601800.1

    Related
    ENSSARP00000002332.2, ENSSART00000002577.2
    Conserved Domains (1) summary
    COG1222
    Location:18 → 401
    RPT1; ATP-dependent 26S proteasome regulatory subunit [Posttranslational modification, protein turnover, chaperones]
Nucleotide Protein
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