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PTPRN protein tyrosine phosphatase receptor type N [ Sorex araneus (European shrew) ]

Gene ID: 101537764, updated on 8-Mar-2024

Summary

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Gene symbol
PTPRN
Gene description
protein tyrosine phosphatase receptor type N
See related
EnsemblRapid:ENSSARG00000029977
Gene type
protein coding
RefSeq status
MODEL
Organism
Sorex araneus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Eulipotyphla; Soricidae; Soricinae; Sorex
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: X
Exon count:
24
Annotation release Status Assembly Chr Location
RS_2023_04 current mSorAra2.pri (GCF_027595985.1) X NC_073313.1 (252238215..252257882, complement)
101 previous assembly SorAra2.0 (GCF_000181275.1) Unplaced Scaffold NW_004545959.1 (5316854..5336179)

Chromosome X - NC_073313.1Genomic Context describing neighboring genes Neighboring gene tubulin alpha-1D chain Neighboring gene DnaJ heat shock protein family (Hsp40) member B2 Neighboring gene aspartyl aminopeptidase Neighboring gene desmin

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein tyrosine phosphatase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein dephosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in secretory granule IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
receptor-type tyrosine-protein phosphatase-like N

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_027595985.1-RS_2023_04

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mSorAra2.pri

Genomic

  1. NC_073313.1 Reference mSorAra2.pri

    Range
    252238215..252257882 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_055123169.1 → XP_054979144.1  receptor-type tyrosine-protein phosphatase-like N isoform X1

    Related
    ENSSARP00000033067.1, ENSSART00000049116.1

  2. XM_055123170.1 → XP_054979145.1  receptor-type tyrosine-protein phosphatase-like N isoform X2

Nucleotide Protein
Heading Accession and Version

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