U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TSPAN18 tetraspanin 18 [ Ochotona princeps (American pika) ]

Gene ID: 101535205, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TSPAN18
Gene description
tetraspanin 18
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 4
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 4 NC_080835.1 (16922578..17046278, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 1 NC_050536.1 (97114963..97127942)

Chromosome 4 - NC_080835.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC131480071 Neighboring gene tumor protein p53 inducible protein 11 Neighboring gene uncharacterized LOC131480170 Neighboring gene CD82 molecule

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
tetraspanin-18

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080835.1 Reference mOchPri1.hap1

    Range
    16922578..17046278 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004585383.2 → XP_004585440.1  tetraspanin-18

    Conserved Domains (2) summary
    cd03156
    Location:105 → 218
    uroplakin_I_like_LEL; Tetraspanin, extracellular domain or large extracellular loop (LEL), uroplakin_I_like family. Tetraspanins are trans-membrane proteins with 4 trans-membrane segments. Both the N- and C-termini lie on the intracellular side of the membrane. This alignment ...
    pfam00335
    Location:8 → 247
    Tetraspannin; Tetraspanin family

  2. XM_058663140.1 → XP_058519123.1  tetraspanin-18

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.