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SPTSSB serine palmitoyltransferase small subunit B [ Ochotona princeps (American pika) ]

Gene ID: 101535079, updated on 8-Mar-2024

Summary

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Gene symbol
SPTSSB
Gene description
serine palmitoyltransferase small subunit B
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 3
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 3 NC_080834.1 (19337723..19364175, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 14 NC_050549.1 (18228039..18229370)

Chromosome 3 - NC_080834.1Genomic Context describing neighboring genes Neighboring gene NMD3 ribosome export adaptor Neighboring gene poly(rC)-binding protein 2-like Neighboring gene otolin 1 Neighboring gene vomeronasal type-2 receptor 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ceramide biosynthetic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in endoplasmic reticulum organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of serine C-palmitoyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of serine C-palmitoyltransferase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
serine palmitoyltransferase small subunit B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080834.1 Reference mOchPri1.hap1

    Range
    19337723..19364175 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058661175.1 → XP_058517158.1  serine palmitoyltransferase small subunit B

  2. XM_058661176.1 → XP_058517159.1  serine palmitoyltransferase small subunit B

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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