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HNRNPC heterogeneous nuclear ribonucleoprotein C [ Ochotona princeps (American pika) ]

Gene ID: 101532931, updated on 8-Mar-2024

Summary

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Gene symbol
HNRNPC
Gene description
heterogeneous nuclear ribonucleoprotein C
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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See HNRNPC in Genome Data Viewer
Location:
chromosome: 6
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 6 NC_080837.1 (45567341..45599747, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 17 NC_050552.1 (45621543..45654118)

Chromosome 6 - NC_080837.1Genomic Context describing neighboring genes Neighboring gene zinc finger protein 219 Neighboring gene transmembrane protein 253 Neighboring gene olfactory receptor 5AU1 Neighboring gene X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like Neighboring gene RPGR interacting protein 1 Neighboring gene X-linked retinitis pigmentosa GTPase regulator-interacting protein 1-like

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heterogeneous nuclear ribonucleoproteins C1/C2
Names
heterogeneous nuclear ribonucleoprotein C (C1/C2)

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080837.1 Reference mOchPri1.hap1

    Range
    45567341..45599747 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058666164.1 → XP_058522147.1  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X2

  2. XM_004584659.3 → XP_004584716.1  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X4

    See identical proteins and their annotated locations for XP_004584716.1

    Conserved Domains (1) summary
    cd12603
    Location:10 → 93
    RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)

  3. XM_058666159.1 → XP_058522142.1  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1

  4. XM_036495560.2 → XP_036351453.1  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1

    Conserved Domains (1) summary
    cd12603
    Location:10 → 93
    RRM_hnRNPC; RNA recognition motif (RRM) found in vertebrate heterogeneous nuclear ribonucleoprotein C1/C2 (hnRNP C1/C2)

  5. XM_058666165.1 → XP_058522148.1  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X3

  6. XM_058666161.1 → XP_058522144.1  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1

  7. XM_058666160.1 → XP_058522143.1  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1

  8. XM_058666162.1 → XP_058522145.1  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1

  9. XM_058666163.1 → XP_058522146.1  heterogeneous nuclear ribonucleoproteins C1/C2 isoform X1

Nucleotide Protein
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