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ARNT2 aryl hydrocarbon receptor nuclear translocator 2 [ Ochotona princeps (American pika) ]

Gene ID: 101522421, updated on 8-Mar-2024

Summary

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Gene symbol
ARNT2
Gene description
aryl hydrocarbon receptor nuclear translocator 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 6
Exon count:
19
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 6 NC_080837.1 (9255618..9415842, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 17 NC_050552.1 (84599582..84722831)

Chromosome 6 - NC_080837.1Genomic Context describing neighboring genes Neighboring gene cell migration inducing hyaluronidase 1 Neighboring gene abhydrolase domain containing 17C, depalmitoylase Neighboring gene uncharacterized LOC131480516 Neighboring gene cortexin domain containing 1 Neighboring gene fumarylacetoacetate hydrolase

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein dimerization activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of aryl hydrocarbon receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of transcription regulator complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
aryl hydrocarbon receptor nuclear translocator 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080837.1 Reference mOchPri1.hap1

    Range
    9255618..9415842 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058665317.1 → XP_058521300.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X2

  2. XM_058665316.1 → XP_058521299.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X1

  3. XM_058665319.1 → XP_058521302.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X4

  4. XM_058665318.1 → XP_058521301.1  aryl hydrocarbon receptor nuclear translocator 2 isoform X3

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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