U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

RNF125 ring finger protein 125 [ Ochotona princeps (American pika) ]

Gene ID: 101521293, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
RNF125
Gene description
ring finger protein 125
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
See RNF125 in Genome Data Viewer
Location:
chromosome: 18
Exon count:
10
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 18 NC_080849.1 (32590629..32684480, complement)
102 previous assembly OchPri4.0 (GCF_014633375.1) 9 NC_050544.1 (34317663..34357219, complement)

Chromosome 18 - NC_080849.1Genomic Context describing neighboring genes Neighboring gene meprin A subunit beta Neighboring gene U6 spliceosomal RNA Neighboring gene ring finger protein 138 Neighboring gene trafficking protein particle complex subunit 8 Neighboring gene uncharacterized LOC131482531

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
E3 ubiquitin-protein ligase RNF125

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080849.1 Reference mOchPri1.hap1

    Range
    32590629..32684480 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058677135.1 → XP_058533118.1  E3 ubiquitin-protein ligase RNF125 isoform X2

  2. XM_058677133.1 → XP_058533116.1  E3 ubiquitin-protein ligase RNF125 isoform X2

  3. XM_058677134.1 → XP_058533117.1  E3 ubiquitin-protein ligase RNF125 isoform X2

  4. XM_058677137.1 → XP_058533120.1  E3 ubiquitin-protein ligase RNF125 isoform X2

  5. XM_004579568.3 → XP_004579625.1  E3 ubiquitin-protein ligase RNF125 isoform X1

    Conserved Domains (2) summary
    cd00162
    Location:36 → 77
    RING; RING-finger (Really Interesting New Gene) domain, a specialized type of Zn-finger of 40 to 60 residues that binds two atoms of zinc; defined by the 'cross-brace' motif C-X2-C-X(9-39)-C-X(1-3)- H-X(2-3)-(N/C/H)-X2-C-X(4-48)C-X2-C; probably involved in ...
    pfam05605
    Location:141 → 196
    zf-Di19; Drought induced 19 protein (Di19), zinc-binding
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.