U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

TOM1L1 target of myb1 like 1 membrane trafficking protein [ Ochotona princeps (American pika) ]

Gene ID: 101518485, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
TOM1L1
Gene description
target of myb1 like 1 membrane trafficking protein
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: 17
Exon count:
17
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 17 NC_080848.1 (24386707..24429860)
102 previous assembly OchPri4.0 (GCF_014633375.1) 19 NC_050554.1 (31263338..31306325, complement)

Chromosome 17 - NC_080848.1Genomic Context describing neighboring genes Neighboring gene uncharacterized LOC105942145 Neighboring gene kinesin family member 2B Neighboring gene cytochrome c oxidase assembly protein COX11, mitochondrial Neighboring gene U6 spliceosomal RNA Neighboring gene syntaxin binding protein 4

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables clathrin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables phosphatidylinositol binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in signal transduction IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
TOM1-like protein 1

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080848.1 Reference mOchPri1.hap1

    Range
    24386707..24429860
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_058675273.1 → XP_058531256.1  TOM1-like protein 1

  2. XM_004591008.4 → XP_004591065.2  TOM1-like protein 1

    Conserved Domains (2) summary
    cd03565
    Location:14 → 154
    VHS_Tom1; VHS domain family, Tom1 subfamily; The VHS domain is an essential part of Tom1 (Target of myb1 - retroviral oncogene) protein. The VHS domain has a superhelical structure similar to the structure of the ARM repeats and is present at the very N-termini of ...
    cd14237
    Location:199 → 290
    GAT_TM1L1; GAT domain found in target of Myb-like protein 1 (Tom1L1)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.