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NHLRC1 NHL repeat containing E3 ubiquitin protein ligase 1 [ Ochotona princeps (American pika) ]

Gene ID: 101516854, updated on 8-Mar-2024

Summary

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Gene symbol
NHLRC1
Gene description
NHL repeat containing E3 ubiquitin protein ligase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Ochotona princeps
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Lagomorpha; Ochotonidae; Ochotona
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 1
Exon count:
1
Annotation release Status Assembly Chr Location
RS_2023_07 current mOchPri1.hap1 (GCF_030435755.1) 1 NC_080832.1 (126826074..126827398)
102 previous assembly OchPri4.0 (GCF_014633375.1) 12 NC_050547.1 (18784755..18785939, complement)

Chromosome 1 - NC_080832.1Genomic Context describing neighboring genes Neighboring gene lysine demethylase 1B Neighboring gene motile sperm domain-containing protein 1-like Neighboring gene thiopurine S-methyltransferase Neighboring gene kinesin family member 13A Neighboring gene elongation factor 1-alpha 1-like Neighboring gene uncharacterized LOC131481875

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables translation repressor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in negative regulation of translation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in proteasome-mediated ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase NHLRC1
Names
NHL repeat containing 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030435755.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mOchPri1.hap1

Genomic

  1. NC_080832.1 Reference mOchPri1.hap1

    Range
    126826074..126827398
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004593098.2 → XP_004593155.2  E3 ubiquitin-protein ligase NHLRC1

Nucleotide Protein
Heading Accession and Version

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