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eloca elongin C paralog a [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101488090, updated on 8-Mar-2024

Summary

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Gene symbol
eloca
Gene description
elongin C paralog a
See related
Ensembl:ENSMZEG00005021455
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Also known as
eloc; tceb1
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: Un
Exon count:
4
Annotation release Status Assembly Chr Location
104 current M_zebra_UMD2a (GCF_000238955.4) Unplaced Scaffold NW_020192319.1 (1771826..1775959)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531724.1 (3876623..3881490)

NW_020192319.1Genomic Context describing neighboring genes Neighboring gene ganglioside induced differentiation associated protein 1 Neighboring gene junctophilin 1a Neighboring gene ubiquitin conjugating enzyme E2 Wb Neighboring gene staufen double-stranded RNA binding protein 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein-macromolecule adaptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of elongin complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
elongin-C
Names
transcription elongation factor B subunit 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NW_020192319.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    1771826..1775959
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004546611.5 → XP_004546668.1  elongin-C

    See identical proteins and their annotated locations for XP_004546668.1

    UniProtKB/TrEMBL
    A0A3P9D339
    Related
    ENSMZEP00005028759.1, ENSMZET00005029667.1
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins

  2. XM_004546613.3 → XP_004546670.1  elongin-C

    See identical proteins and their annotated locations for XP_004546670.1

    UniProtKB/TrEMBL
    A0A3P9D339
    Conserved Domains (1) summary
    cd18321
    Location:18 → 112
    BTB_POZ_EloC; BTB (Broad-Complex, Tramtrack and Bric a brac) /POZ (poxvirus and zinc finger) domain found in Elongin-C (EloC) and similar proteins
Nucleotide Protein
Heading Accession and Version

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