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neurl1b neuralized E3 ubiquitin protein ligase 1B [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101487209, updated on 8-Mar-2024

Summary

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Gene symbol
neurl1b
Gene description
neuralized E3 ubiquitin protein ligase 1B
See related
Ensembl:ENSMZEG00005010146
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG2
Exon count:
7
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG2 NC_036781.1 (20729618..20757371)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531715.1 (1945921..1973692, complement)

Linkage Group LG2 - NC_036781.1Genomic Context describing neighboring genes Neighboring gene endoplasmic reticulum-golgi intermediate compartment 1 Neighboring gene dual specificity phosphatase 1 Neighboring gene melatonin receptor type 1B Neighboring gene uncharacterized LOC106676119

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in ubiquitin-dependent endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in early endosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase NEURL1B

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036781.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    20729618..20757371
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004541018.1 → XP_004541075.1  E3 ubiquitin-protein ligase NEURL1B isoform X1

    UniProtKB/TrEMBL
    A0A3P9BUE1
    Conserved Domains (2) summary
    cd16786
    Location:544 → 586
    mRING-HC-C3HC5_NEU1B; Modified RING finger, HC subclass (C3HC5-type), found in neuralized-like protein 1B (NEURL1B)
    pfam07177
    Location:75 → 227
    Neuralized

  2. XM_014412057.1 → XP_014267543.1  E3 ubiquitin-protein ligase NEURL1B isoform X2

    UniProtKB/TrEMBL
    A0A3P9BUD9, A0A3P9BUE1
    Related
    ENSMZEP00005013499.1, ENSMZET00005013958.1
    Conserved Domains (2) summary
    cd16786
    Location:522 → 564
    mRING-HC-C3HC5_NEU1B; Modified RING finger, HC subclass (C3HC5-type), found in neuralized-like protein 1B (NEURL1B)
    pfam07177
    Location:53 → 205
    Neuralized

  3. XM_023154486.1 → XP_023010254.1  E3 ubiquitin-protein ligase NEURL1B isoform X3

    UniProtKB/TrEMBL
    A0A3P9BUE1
    Related
    ENSMZEP00005013532.1, ENSMZET00005013991.1
    Conserved Domains (2) summary
    cd16786
    Location:521 → 563
    mRING-HC-C3HC5_NEU1B; Modified RING finger, HC subclass (C3HC5-type), found in neuralized-like protein 1B (NEURL1B)
    pfam07177
    Location:52 → 204
    Neuralized
Nucleotide Protein
Heading Accession and Version

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