U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101485570 ATM serine/threonine kinase [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101485570, updated on 21-Dec-2023

Summary

Go to the top of the page Help
Gene symbol
LOC101485570
Gene description
ATM serine/threonine kinase
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Also known as
atm
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: LG14
Exon count:
63
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG14 NC_036793.1 (12430069..12454048)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531784.1 (321..24499, complement)

Linkage Group LG14 - NC_036793.1Genomic Context describing neighboring genes Neighboring gene vacuole membrane protein 1 Neighboring gene nuclear protein, ataxia-telangiectasia locus Neighboring gene beta-secretase 2 Neighboring gene endogenous retrovirus group FC1 Env polyprotein-like

Genomic regions, transcripts, and products

Go to the top of the page Help

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables protein binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables protein serine/threonine kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in DNA repair IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
serine-protein kinase ATM

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036793.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    12430069..12454048
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014408671.2 → XP_014264157.2  serine-protein kinase ATM

    Conserved Domains (4) summary
    cd05171
    Location:2720 → 2999
    PIKKc_ATM; Catalytic domain of Ataxia Telangiectasia Mutated
    pfam02259
    Location:2132 → 2530
    FAT; FAT domain
    pfam11640
    Location:8 → 167
    TAN; Telomere-length maintenance and DNA damage repair
    cl26692
    Location:2531 → 3094
    FRB_dom; FKBP12-rapamycin binding domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.