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ccdc138 coiled-coil domain containing 138 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101484995, updated on 18-Aug-2023

Summary

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Gene symbol
ccdc138
Gene description
coiled-coil domain containing 138
See related
Ensembl:ENSMZEG00005010559
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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Location:
chromosome: LG16
Exon count:
17
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG16 NC_036795.1 (23033191..23051621, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531753.1 (3188164..3207577, complement)

Linkage Group LG16 - NC_036795.1Genomic Context describing neighboring genes Neighboring gene SH3 domain containing ring finger 3 Neighboring gene ectodysplasin A receptor Neighboring gene vestigial-like family member 3 Neighboring gene charged multivesicular body protein 2Ba

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

General protein information

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Preferred Names
coiled-coil domain-containing protein 138

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036795.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    23033191..23051621 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004555547.2 → XP_004555604.2  coiled-coil domain-containing protein 138 isoform X1

    UniProtKB/TrEMBL
    A0A3P9BVM8
    Conserved Domains (1) summary
    cl25732
    Location:139 → 275
    SMC_N; RecF/RecN/SMC N terminal domain

  2. XM_012920257.2 → XP_012775711.2  coiled-coil domain-containing protein 138 isoform X2

    UniProtKB/TrEMBL
    A0A3P9BVM8, A0A3P9BVN6
    Conserved Domains (1) summary
    cl25732
    Location:47 → 183
    SMC_N; RecF/RecN/SMC N terminal domain

  3. XM_004555550.2 → XP_004555607.2  coiled-coil domain-containing protein 138 isoform X2

    UniProtKB/TrEMBL
    A0A3P9BVM8, A0A3P9BVN6
    Conserved Domains (1) summary
    cl25732
    Location:47 → 183
    SMC_N; RecF/RecN/SMC N terminal domain

  4. XM_004555549.3 → XP_004555606.2  coiled-coil domain-containing protein 138 isoform X2

    UniProtKB/TrEMBL
    A0A3P9BVM8, A0A3P9BVN6
    Conserved Domains (1) summary
    cl25732
    Location:47 → 183
    SMC_N; RecF/RecN/SMC N terminal domain

  5. XM_004555548.4 → XP_004555605.2  coiled-coil domain-containing protein 138 isoform X2

    UniProtKB/TrEMBL
    A0A3P9BVM8, A0A3P9BVN6
    Related
    ENSMZEP00005014018.1, ENSMZET00005014490.1
    Conserved Domains (1) summary
    cl25732
    Location:47 → 183
    SMC_N; RecF/RecN/SMC N terminal domain
Nucleotide Protein
Heading Accession and Version

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