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rnf14 ring finger protein 14 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101484776, updated on 8-Mar-2024

Summary

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Gene symbol
rnf14
Gene description
ring finger protein 14
See related
Ensembl:ENSMZEG00005003001
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG10
Exon count:
10
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG10 NC_036789.1 (20165082..20171069, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531733.1 (6152661..6157579, complement)

Linkage Group LG10 - NC_036789.1Genomic Context describing neighboring genes Neighboring gene Nedd4 family interacting protein 1 Neighboring gene endonuclease, polyU-specific 2 Neighboring gene heat shock protein 4a Neighboring gene zinc finger, CCHC domain containing 10 Neighboring gene AF4/FMR2 family, member 4

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ubiquitin conjugating enzyme binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ubiquitin protein ligase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables zinc ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in positive regulation of proteasomal ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein polyubiquitination IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in ubiquitin-dependent protein catabolic process IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of ubiquitin ligase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
E3 ubiquitin-protein ligase RNF14

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036789.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    20165082..20171069 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012918938.4 → XP_012774392.1  E3 ubiquitin-protein ligase RNF14 isoform X2

    Conserved Domains (3) summary
    pfam01485
    Location:263 → 319
    IBR; IBR domain, a half RING-finger domain
    pfam05773
    Location:6 → 103
    RWD; RWD domain
    cd16628
    Location:191 → 243
    RING-HC_RBR_RNF14; RING finger, HC subclass, found in RING finger protein 14 (RNF14) and similar proteins

  2. XM_004550365.5 → XP_004550422.1  E3 ubiquitin-protein ligase RNF14 isoform X1

    See identical proteins and their annotated locations for XP_004550422.1

    UniProtKB/TrEMBL
    A0A3P9B1Z0
    Related
    ENSMZEP00005003889.1, ENSMZET00005004050.1
    Conserved Domains (3) summary
    pfam01485
    Location:286 → 342
    IBR; IBR domain, a half RING-finger domain
    pfam05773
    Location:6 → 126
    RWD; RWD domain
    cd16628
    Location:214 → 266
    RING-HC_RBR_RNF14; RING finger, HC subclass, found in RING finger protein 14 (RNF14) and similar proteins

  3. XM_012918937.4 → XP_012774391.1  E3 ubiquitin-protein ligase RNF14 isoform X1

    See identical proteins and their annotated locations for XP_012774391.1

    UniProtKB/TrEMBL
    A0A3P9B1Z0
    Conserved Domains (3) summary
    pfam01485
    Location:286 → 342
    IBR; IBR domain, a half RING-finger domain
    pfam05773
    Location:6 → 126
    RWD; RWD domain
    cd16628
    Location:214 → 266
    RING-HC_RBR_RNF14; RING finger, HC subclass, found in RING finger protein 14 (RNF14) and similar proteins
Nucleotide Protein
Heading Accession and Version

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