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elac2 elaC ribonuclease Z 2 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101483694, updated on 8-Mar-2024

Summary

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Gene symbol
elac2
Gene description
elaC ribonuclease Z 2
See related
Ensembl:ENSMZEG00005000530
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG4
Exon count:
24
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG4 NC_036783.1 (26534204..26551484)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531757.1 (601984..619257)

Linkage Group LG4 - NC_036783.1Genomic Context describing neighboring genes Neighboring gene transmembrane protein 220 Neighboring gene mitogen-activated protein kinase kinase 4a Neighboring gene protein shisa-6 Neighboring gene phosphoinositide-interacting protein

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-tRNA processing endoribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial tRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc phosphodiesterase ELAC protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036783.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    26534204..26551484
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004556375.5 → XP_004556432.1  zinc phosphodiesterase ELAC protein 2

    UniProtKB/TrEMBL
    A0A3P9ASG3
    Related
    ENSMZEP00005000553.1, ENSMZET00005000618.1
    Conserved Domains (2) summary
    cd07718
    Location:505 → 707
    RNaseZ_ELAC1_ELAC2-C-term-like_MBL-fold; Ribonuclease Z ELAC1, C-terminus of ELAC2, and related proteins; MBL-fold metallo-hydrolase domain
    cl23716
    Location:86 → 331
    metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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