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npm3 nucleophosmin/nucleoplasmin, 3 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101473041, updated on 8-Mar-2024

Summary

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Gene symbol
npm3
Gene description
nucleophosmin/nucleoplasmin, 3
See related
Ensembl:ENSMZEG00005003091
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
zebrafish all
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Genomic context

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See npm3 in Genome Data Viewer
Location:
chromosome: LG13
Exon count:
5
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG13 NC_036792.1 (17506140..17509419)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531755.1 (856422..859711)

Linkage Group LG13 - NC_036792.1Genomic Context describing neighboring genes Neighboring gene PPARG related coactivator 1 Neighboring gene small nucleolar RNA SNORA50 Neighboring gene O-GlcNAcase Neighboring gene E3 ubiquitin-protein ligase TRIM8 Neighboring gene suppressor of fused homolog (Drosophila)

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables chromatin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables histone binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chromatin remodeling IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleolus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in nucleoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
nucleoplasmin-3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036792.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    17506140..17509419
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004555850.3 → XP_004555907.1  nucleoplasmin-3

    UniProtKB/TrEMBL
    A0A3P9B257
    Related
    ENSMZEP00005003995.1, ENSMZET00005004157.1
    Conserved Domains (1) summary
    pfam03066
    Location:20 → 131
    Nucleoplasmin; Nucleoplasmin
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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