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htatip2 HIV-1 Tat interactive protein 2 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101465940, updated on 8-Mar-2024

Summary

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Gene symbol
htatip2
Gene description
HIV-1 Tat interactive protein 2
See related
Ensembl:ENSMZEG00005014464
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG1
Exon count:
6
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG1 NC_036780.1 (32549710..32553459, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531894.1 (238941..242690)

Linkage Group LG1 - NC_036780.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 6 member 5 Neighboring gene protein arginine methyltransferase 3 Neighboring gene developing brain homeobox 1a Neighboring gene neuron navigator 2a

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables NAD binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in import into nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
oxidoreductase HTATIP2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036780.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    32549710..32553459 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004571051.1 → XP_004571108.1  oxidoreductase HTATIP2

    UniProtKB/TrEMBL
    A0A3P9CAG7, A0A3P9CB97
    Related
    ENSMZEP00005019269.1, ENSMZET00005019891.1
    Conserved Domains (1) summary
    cd05250
    Location:59 → 270
    CC3_like_SDR_a; CC3(TIP30)-like, atypical (a) SDRs
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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