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yif1b Yip1 interacting factor homolog B (S. cerevisiae) [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101465236, updated on 8-Mar-2024

Summary

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Gene symbol
yif1b
Gene description
Yip1 interacting factor homolog B (S. cerevisiae)
See related
Ensembl:ENSMZEG00005014342
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
Orthologs
human zebrafish all
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Genomic context

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Location:
chromosome: LG14
Exon count:
8
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG14 NC_036793.1 (16104026..16109746, complement)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531719.1 (6920424..6926159)

Linkage Group LG14 - NC_036793.1Genomic Context describing neighboring genes Neighboring gene NACHT and WD repeat domain-containing protein 2 Neighboring gene probable E3 ubiquitin-protein ligase HERC6 Neighboring gene uncharacterized protein C14orf132 Neighboring gene HHIP-like protein 1

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in endoplasmic reticulum to Golgi vesicle-mediated transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in COPII-coated ER to Golgi transport vesicle IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in Golgi membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in endoplasmic reticulum-Golgi intermediate compartment IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
protein YIF1B
Names
Yip1 interacting factor homolog B, membrane trafficking protein

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036793.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    16104026..16109746 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004543841.5 → XP_004543898.1  protein YIF1B isoform X2

    See identical proteins and their annotated locations for XP_004543898.1

    UniProtKB/TrEMBL
    A0A3P9CAT6
    Related
    ENSMZEP00005019119.1, ENSMZET00005019733.1
    Conserved Domains (1) summary
    pfam03878
    Location:65 → 300
    YIF1

  2. XM_004543840.5 → XP_004543897.1  protein YIF1B isoform X1

    See identical proteins and their annotated locations for XP_004543897.1

    Conserved Domains (1) summary
    pfam03878
    Location:68 → 303
    YIF1
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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