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susd2 sushi domain containing 2 [ Maylandia zebra (zebra mbuna) ]

Gene ID: 101464913, updated on 21-Dec-2023

Summary

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Gene symbol
susd2
Gene description
sushi domain containing 2
See related
Ensembl:ENSMZEG00005018380
Gene type
protein coding
RefSeq status
MODEL
Organism
Maylandia zebra
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Neoteleostei; Acanthomorphata; Ovalentaria; Cichlomorphae; Cichliformes; Cichlidae; African cichlids; Pseudocrenilabrinae; Haplochromini; Maylandia; Maylandia zebra complex
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Genomic context

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Location:
chromosome: LG7
Exon count:
16
Annotation release Status Assembly LG Location
104 current M_zebra_UMD2a (GCF_000238955.4) LG7 NC_036786.1 (42585107..42596556)
101 previous assembly MetZeb1.1 (GCF_000238955.1) Unplaced Scaffold NW_004531711.1 (6360600..6372061, complement)

Linkage Group LG7 - NC_036786.1Genomic Context describing neighboring genes Neighboring gene synaptic vesicle 2-related protein Neighboring gene myosin IHb Neighboring gene heat shock protein beta-1-like Neighboring gene TAO kinase 3b

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Component Evidence Code Pubs
located_in extracellular space IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
sushi domain-containing protein 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Maylandia zebra Annotation Release 104 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference M_zebra_UMD2a Primary Assembly

Genomic

  1. NC_036786.1 Reference M_zebra_UMD2a Primary Assembly

    Range
    42585107..42596556
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004538107.5 → XP_004538164.1  sushi domain-containing protein 2

    UniProtKB/TrEMBL
    A0A3P9CRC2
    Related
    ENSMZEP00005024587.1, ENSMZET00005025391.1
    Conserved Domains (4) summary
    cd00033
    Location:715 → 769
    CCP; Complement control protein (CCP) modules (aka short consensus repeats SCRs or SUSHI repeats) have been identified in several proteins of the complement system
    pfam01033
    Location:24 → 58
    Somatomedin_B; Somatomedin B domain
    pfam03782
    Location:281 → 423
    AMOP; AMOP domain
    cl02516
    Location:440 → 601
    VWD; von Willebrand factor type D domain

RNA

  1. XR_190851.4 RNA Sequence

Nucleotide Protein
Heading Accession and Version

Gene LinkOut

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