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EPDR1 ependymin related 1 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101417962, updated on 8-Mar-2024

Summary

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Gene symbol
EPDR1
Gene description
ependymin related 1
See related
Ensembl:ENSDNOG00000048474
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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See EPDR1 in Genome Data Viewer
Location:
chromosome: 5
Exon count:
3
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 5 NC_080677.1 (21209903..21257671, complement)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004472265.1 (214585..263453, complement)

Chromosome 5 - NC_080677.1Genomic Context describing neighboring genes Neighboring gene T cell receptor gamma constant 2 Neighboring gene T-cell receptor gamma chain C region DFL12-like Neighboring gene STARD3 N-terminal like Neighboring gene secreted frizzled related protein 4 Neighboring gene NME/NM23 family member 8

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables calcium ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell-matrix adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in extracellular region IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in lysosome IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
mammalian ependymin-related protein 1
Names
ependymin related protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080677.1 Reference mDasNov1.hap2

    Range
    21209903..21257671 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004454250.4 → XP_004454307.2  mammalian ependymin-related protein 1

    Related
    ENSDNOP00000034800.1
    Conserved Domains (1) summary
    pfam00811
    Location:217 → 338
    Ependymin; Ependymin
Nucleotide Protein
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