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PROX1 prospero homeobox 1 [ Dasypus novemcinctus (nine-banded armadillo) ]

Gene ID: 101415222, updated on 8-Mar-2024

Summary

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Gene symbol
PROX1
Gene description
prospero homeobox 1
See related
Ensembl:ENSDNOG00000001297
Gene type
protein coding
RefSeq status
MODEL
Organism
Dasypus novemcinctus
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Xenarthra; Cingulata; Dasypodidae; Dasypus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: 13
Exon count:
11
Annotation release Status Assembly Chr Location
RS_2023_07 current mDasNov1.hap2 (GCF_030445035.1) 13 NC_080685.1 (100109447..100160136)
102 previous assembly Dasnov3.0 (GCF_000208655.1) Unplaced Scaffold NW_004483452.1 (1386958..1437065)

Chromosome 13 - NC_080685.1Genomic Context describing neighboring genes Neighboring gene ribosomal protein S6 kinase C1 Neighboring gene small nucleolar RNA U13 Neighboring gene uncharacterized LOC105747345 Neighboring gene transfer RNA glycine (anticodon CCC) Neighboring gene uncharacterized LOC111767216 Neighboring gene SET and MYND domain containing 2

Genomic regions, transcripts, and products

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Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables DNA-binding transcription factor activity, RNA polymerase II-specific IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables RNA polymerase II cis-regulatory region sequence-specific DNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in regulation of transcription by RNA polymerase II IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in nucleus IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
prospero homeobox protein 1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: GCF_030445035.1-RS_2023_07

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference mDasNov1.hap2

Genomic

  1. NC_080685.1 Reference mDasNov1.hap2

    Range
    100109447..100160136
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004470995.4 → XP_004471052.1  prospero homeobox protein 1 isoform X1

    See identical proteins and their annotated locations for XP_004471052.1

    Related
    ENSDNOP00000000994.2
    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  2. XM_058275213.1 → XP_058131196.1  prospero homeobox protein 1 isoform X2

  3. XM_004470996.4 → XP_004471053.1  prospero homeobox protein 1 isoform X2

    Conserved Domains (2) summary
    pfam05044
    Location:579 → 730
    HPD; Homeo-prospero domain
    pfam09805
    Location:229 → 278
    Nop25; Nucleolar protein 12 (25kDa)

  4. XM_004470993.4 → XP_004471050.1  prospero homeobox protein 1 isoform X1

    See identical proteins and their annotated locations for XP_004471050.1

    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  5. XM_058275210.1 → XP_058131193.1  prospero homeobox protein 1 isoform X1

  6. XM_058275214.1 → XP_058131197.1  prospero homeobox protein 1 isoform X2

  7. XM_058275211.1 → XP_058131194.1  prospero homeobox protein 1 isoform X2

  8. XM_058275209.1 → XP_058131192.1  prospero homeobox protein 1 isoform X1

  9. XM_058275212.1 → XP_058131195.1  prospero homeobox protein 1 isoform X2

  10. XM_058275207.1 → XP_058131190.1  prospero homeobox protein 1 isoform X1

  11. XM_058275216.1 → XP_058131199.1  prospero homeobox protein 1 isoform X2

  12. XM_023592430.2 → XP_023448198.1  prospero homeobox protein 1 isoform X1

    Conserved Domains (1) summary
    pfam05044
    Location:579 → 731
    HPD; Homeo-prospero domain

  13. XM_058275218.1 → XP_058131201.1  prospero homeobox protein 1 isoform X2

  14. XM_058275215.1 → XP_058131198.1  prospero homeobox protein 1 isoform X2

Nucleotide Protein
Heading Accession and Version

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