U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

LOC101408909 synuclein alpha [ Ceratotherium simum simum (southern white rhinoceros) ]

Gene ID: 101408909, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
LOC101408909
Gene description
synuclein alpha
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratotherium simum simum (sub-species: simum)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Ceratotherium
Also known as
SNCA
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current CerSimSim1.0 (GCF_000283155.1) Unplaced Scaffold NW_004454188.1 (12915133..13035791, complement)

NW_004454188.1Genomic Context describing neighboring genes Neighboring gene tigger transposable element derived 2 Neighboring gene GPRIN family member 3 Neighboring gene multimerin 1 Neighboring gene coiled-coil serine rich protein 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004454188.1 Unplaced Scaffold Reference CerSimSim1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables cuprous ion binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in chemical synaptic transmission IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in regulation of dopamine secretion IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synapse organization IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in synaptic vesicle endocytosis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in axon terminus IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in neuronal cell body IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
alpha-synuclein
Names
synuclein, alpha (non A4 component of amyloid precursor)

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Ceratotherium simum simum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CerSimSim1.0 Primary Assembly

Genomic

  1. NW_004454188.1 Reference CerSimSim1.0 Primary Assembly

    Range
    12915133..13035791 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014787889.1 → XP_014643375.1  alpha-synuclein isoform X2

    Conserved Domains (1) summary
    pfam01387
    Location:1 → 103
    Synuclein; Synuclein

  2. XM_014787890.1 → XP_014643376.1  alpha-synuclein isoform X3

    Conserved Domains (1) summary
    pfam01387
    Location:1 → 127
    Synuclein; Synuclein

  3. XM_014787887.1 → XP_014643373.1  alpha-synuclein isoform X1

    Conserved Domains (1) summary
    pfam01387
    Location:1 → 103
    Synuclein; Synuclein

  4. XM_014787885.1 → XP_014643371.1  alpha-synuclein isoform X1

    Conserved Domains (1) summary
    pfam01387
    Location:1 → 103
    Synuclein; Synuclein

  5. XM_014787886.1 → XP_014643372.1  alpha-synuclein isoform X1

    Conserved Domains (1) summary
    pfam01387
    Location:1 → 103
    Synuclein; Synuclein

  6. XM_014787888.1 → XP_014643374.1  alpha-synuclein isoform X1

    Conserved Domains (1) summary
    pfam01387
    Location:1 → 103
    Synuclein; Synuclein

  7. XM_014787884.1 → XP_014643370.1  alpha-synuclein isoform X1

    Conserved Domains (1) summary
    pfam01387
    Location:1 → 103
    Synuclein; Synuclein
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.