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LOC101407265 elaC ribonuclease Z 2 [ Ceratotherium simum simum (southern white rhinoceros) ]

Gene ID: 101407265, updated on 8-Mar-2024

Summary

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Gene symbol
LOC101407265
Gene description
elaC ribonuclease Z 2
Gene type
protein coding
RefSeq status
MODEL
Organism
Ceratotherium simum simum (sub-species: simum)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Perissodactyla; Rhinocerotidae; Ceratotherium
Also known as
ELAC2
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
24
Annotation release Status Assembly Chr Location
101 current CerSimSim1.0 (GCF_000283155.1) Unplaced Scaffold NW_004454199.1 (6111972..6134515)

NW_004454199.1Genomic Context describing neighboring genes Neighboring gene protoheme IX farnesyltransferase, mitochondrial Neighboring gene heparan sulfate-glucosamine 3-sulfotransferase 3A1 Neighboring gene Rho GTPase activating protein 44 Neighboring gene uncharacterized LOC106802293

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004454199.1 Unplaced Scaffold Reference CerSimSim1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables 3'-tRNA processing endoribonuclease activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in mitochondrial tRNA 3'-end processing IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in mitochondrion IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
zinc phosphodiesterase ELAC protein 2
Names
elaC homolog 2

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Ceratotherium simum simum Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference CerSimSim1.0 Primary Assembly

Genomic

  1. NW_004454199.1 Reference CerSimSim1.0 Primary Assembly

    Range
    6111972..6134515
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_014789494.1 → XP_014644980.1  zinc phosphodiesterase ELAC protein 2

    Conserved Domains (4) summary
    COG1234
    Location:475 → 745
    ElaC; Ribonuclease BN, tRNA processing enzyme [Translation, ribosomal structure and biogenesis]
    cd07718
    Location:476 → 681
    RNaseZ_ELAC1_ELAC2-C-term-like_MBL-fold; Ribonuclease Z ELAC1, C-terminus of ELAC2, and related proteins; MBL-fold metallo-hydrolase domain
    cd16296
    Location:55 → 304
    RNaseZ_ELAC2-N-term-like_MBL-fold; Ribonuclease Z, N-terminus of human ELAC2 and related proteins; MBL-fold metallo-hydrolase domain
    cl23716
    Location:649 → 723
    metallo-hydrolase-like_MBL-fold; mainly hydrolytic enzymes and related proteins which carry out various biological functions; MBL-fold metallohydrolase domain
Nucleotide Protein
Heading Accession and Version

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