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UBFD1 ubiquitin family domain containing 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101382796, updated on 8-Mar-2024

Summary

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Gene symbol
UBFD1
Gene description
ubiquitin family domain containing 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450354.1 (1221565..1233231, complement)

NW_004450354.1Genomic Context describing neighboring genes Neighboring gene partner and localizer of BRCA2 Neighboring gene NADH:ubiquinone oxidoreductase subunit AB1 Neighboring gene glutamyl-tRNA synthetase 2, mitochondrial Neighboring gene golgi associated, gamma adaptin ear containing, ARF binding protein 2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450354.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables RNA binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cadherin binding IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ubiquitin domain-containing protein UBFD1

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450354.1 Reference Oros_1.0 Primary Assembly

    Range
    1221565..1233231 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004398806.2 → XP_004398863.1  ubiquitin domain-containing protein UBFD1

    See identical proteins and their annotated locations for XP_004398863.1

    UniProtKB/TrEMBL
    A0A2U3VU22, A0A9B0H4E3
    Conserved Domains (1) summary
    cd17047
    Location:86 → 155
    Ubl_UBFD1; ubiquitin-like (Ubl) domain found in ubiquitin domain-containing protein UBFD1 and similar proteins
Nucleotide Protein
Heading Accession and Version

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