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ABCC5 ATP binding cassette subfamily C member 5 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101381957, updated on 8-Mar-2024

Summary

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Gene symbol
ABCC5
Gene description
ATP binding cassette subfamily C member 5
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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See ABCC5 in Genome Data Viewer
Location:
chromosome: Un
Exon count:
30
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450571.1 (1627976..1714928)

NW_004450571.1Genomic Context describing neighboring genes Neighboring gene 5-hydroxytryptamine receptor 3C-like Neighboring gene 5-hydroxytryptamine receptor 3C Neighboring gene presenilin associated rhomboid like Neighboring gene MAP6 domain containing 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450571.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ABC-type transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables ATP hydrolysis activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in transmembrane transport IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
multidrug resistance-associated protein 5

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450571.1 Reference Oros_1.0 Primary Assembly

    Range
    1627976..1714928
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004406791.2 → XP_004406848.1  multidrug resistance-associated protein 5 isoform X3

    See identical proteins and their annotated locations for XP_004406848.1

    UniProtKB/TrEMBL
    A0A2U3ZN80
    Conserved Domains (1) summary
    PLN03232
    Location:100 → 162
    PLN03232; ABC transporter C family member; Provisional

  2. XM_004406789.2 → XP_004406846.1  multidrug resistance-associated protein 5 isoform X1

    UniProtKB/TrEMBL
    A0A2U3WE44
    Conserved Domains (4) summary
    cd03244
    Location:1191 → 1411
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    cd03250
    Location:577 → 759
    ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
    TIGR01271
    Location:100 → 1430
    CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
    cl00549
    Location:863 → 1143
    ABC_membrane; ABC transporter transmembrane region

  3. XM_012564617.1 → XP_012420071.1  multidrug resistance-associated protein 5 isoform X3

    See identical proteins and their annotated locations for XP_012420071.1

    UniProtKB/TrEMBL
    A0A2U3ZN80
    Conserved Domains (1) summary
    PLN03232
    Location:100 → 162
    PLN03232; ABC transporter C family member; Provisional

  4. XM_004406790.2 → XP_004406847.1  multidrug resistance-associated protein 5 isoform X3

    See identical proteins and their annotated locations for XP_004406847.1

    UniProtKB/TrEMBL
    A0A2U3ZN80
    Conserved Domains (1) summary
    PLN03232
    Location:100 → 162
    PLN03232; ABC transporter C family member; Provisional

  5. XM_012564616.1 → XP_012420070.1  multidrug resistance-associated protein 5 isoform X2

    Conserved Domains (4) summary
    cd03244
    Location:1148 → 1368
    ABCC_MRP_domain2; ATP-binding cassette domain 2 of multidrug resistance-associated protein
    cd03250
    Location:577 → 759
    ABCC_MRP_domain1; ATP-binding cassette domain 1 of multidrug resistance-associated protein, subfamily C
    TIGR01271
    Location:100 → 1387
    CFTR_protein; cystic fibrosis transmembrane conductor regulator (CFTR)
    cl00549
    Location:863 → 1042
    ABC_membrane; ABC transporter transmembrane region
Nucleotide Protein
Heading Accession and Version

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