U.S. flag

An official website of the United States government

Format

Send to:

Choose Destination

YJU2B YJU2 splicing factor homolog B [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101379127, updated on 8-Mar-2024

Summary

Go to the top of the page Help
Gene symbol
YJU2B
Gene description
YJU2 splicing factor homolog B
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Also known as
CCDC130
Orthologs
human mouse all
NEW
Try the new Gene table
Try the new Transcript table

Genomic context

Go to the top of the page Help
Location:
chromosome: Un
Exon count:
10
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450355.1 (2983435..2993381)

NW_004450355.1Genomic Context describing neighboring genes Neighboring gene immediate early response 2 Neighboring gene calcium voltage-gated channel subunit alpha1 A Neighboring gene chromosome unknown open reading frame, human C19orf53 Neighboring gene methylthioribose-1-phosphate isomerase 1

Genomic regions, transcripts, and products

Go to the top of the page Help
Genomic Sequence:
NW_004450355.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

Go to the top of the pageHelp

GeneRIFs: Gene References Into Functions

General gene information

Go to the top of the page Help

Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in mRNA splicing, via spliceosome IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of U2-type spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of post-mRNA release spliceosomal complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

Go to the top of the page Help
Preferred Names
coiled-coil domain-containing protein 130
Names
coiled-coil domain containing 130

NCBI Reference Sequences (RefSeq)

Go to the top of the page Help

NEW Try the new Transcript table

RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450355.1 Reference Oros_1.0 Primary Assembly

    Range
    2983435..2993381
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004398966.2 → XP_004399023.1  coiled-coil domain-containing protein 130 isoform X2

    UniProtKB/TrEMBL
    A0A2U3VUH6
    Conserved Domains (3) summary
    COG5134
    Location:7 → 269
    COG5134; Uncharacterized conserved protein [Function unknown]
    pfam04502
    Location:8 → 226
    DUF572; Family of unknown function (DUF572)
    pfam05350
    Location:187 → 379
    GSK-3_bind; Glycogen synthase kinase-3 binding

  2. XM_012561846.1 → XP_012417300.1  coiled-coil domain-containing protein 130 isoform X1

    Conserved Domains (2) summary
    COG5134
    Location:86 → 348
    COG5134; Uncharacterized conserved protein [Function unknown]
    pfam04502
    Location:87 → 305
    DUF572; Family of unknown function (DUF572)
Nucleotide Protein
Heading Accession and Version

Gene LinkOut

The following LinkOut resources are supplied by external providers. These providers are responsible for maintaining the links.