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ATP5PF ATP synthase peripheral stalk subunit F6 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101378690, updated on 8-Mar-2024

Summary

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Gene symbol
ATP5PF
Gene description
ATP synthase peripheral stalk subunit F6
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Also known as
ATP5J
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
5
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450999.1 (878836..889178)

NW_004450999.1Genomic Context describing neighboring genes Neighboring gene amyloid beta precursor protein Neighboring gene F-box only protein 27 pseudogene Neighboring gene GA binding protein transcription factor subunit alpha Neighboring gene junctional adhesion molecule 2 Neighboring gene mitochondrial ribosomal protein L39

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450999.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables proton transmembrane transporter activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in proton motive force-driven ATP synthesis IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of mitochondrial proton-transporting ATP synthase complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of mitochondrial proton-transporting ATP synthase complex, coupling factor F(o) IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ATP synthase-coupling factor 6, mitochondrial
Names
ATP synthase, H+ transporting, mitochondrial Fo complex subunit F6

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450999.1 Reference Oros_1.0 Primary Assembly

    Range
    878836..889178
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004413357.2 → XP_004413414.1  ATP synthase-coupling factor 6, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_004413414.1

    UniProtKB/TrEMBL
    A0A2U3WVA5
    Conserved Domains (1) summary
    pfam05511
    Location:1 → 96
    ATP-synt_F6; Mitochondrial ATP synthase coupling factor 6

  2. XM_004413358.1 → XP_004413415.1  ATP synthase-coupling factor 6, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_004413415.1

    UniProtKB/TrEMBL
    A0A2U3WVA5
    Conserved Domains (1) summary
    pfam05511
    Location:1 → 96
    ATP-synt_F6; Mitochondrial ATP synthase coupling factor 6

  3. XM_004413356.1 → XP_004413413.1  ATP synthase-coupling factor 6, mitochondrial isoform X1

    UniProtKB/TrEMBL
    A0A2U3WVC4
    Conserved Domains (1) summary
    pfam05511
    Location:9 → 104
    ATP-synt_F6; Mitochondrial ATP synthase coupling factor 6

  4. XM_004413359.1 → XP_004413416.1  ATP synthase-coupling factor 6, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_004413416.1

    UniProtKB/TrEMBL
    A0A2U3WVA5
    Conserved Domains (1) summary
    pfam05511
    Location:1 → 96
    ATP-synt_F6; Mitochondrial ATP synthase coupling factor 6

  5. XM_004413360.1 → XP_004413417.1  ATP synthase-coupling factor 6, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_004413417.1

    UniProtKB/TrEMBL
    A0A2U3WVA5
    Conserved Domains (1) summary
    pfam05511
    Location:1 → 96
    ATP-synt_F6; Mitochondrial ATP synthase coupling factor 6

  6. XM_012566998.1 → XP_012422452.1  ATP synthase-coupling factor 6, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_012422452.1

    UniProtKB/TrEMBL
    A0A2U3WVA5
    Conserved Domains (1) summary
    pfam05511
    Location:1 → 96
    ATP-synt_F6; Mitochondrial ATP synthase coupling factor 6

  7. XM_012566999.1 → XP_012422453.1  ATP synthase-coupling factor 6, mitochondrial isoform X2

    See identical proteins and their annotated locations for XP_012422453.1

    UniProtKB/TrEMBL
    A0A2U3WVA5
    Conserved Domains (1) summary
    pfam05511
    Location:1 → 96
    ATP-synt_F6; Mitochondrial ATP synthase coupling factor 6
Nucleotide Protein
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