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HS6ST3 heparan sulfate 6-O-sulfotransferase 3 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101377706, updated on 8-Mar-2024

Summary

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Gene symbol
HS6ST3
Gene description
heparan sulfate 6-O-sulfotransferase 3
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
2
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450658.1 (640710..1267983, complement)

NW_004450658.1Genomic Context describing neighboring genes Neighboring gene 60S ribosomal protein L32 pseudogene Neighboring gene oxoglutarate receptor 1 Neighboring gene ubiquitin-conjugating enzyme E2 variant 3 pseudogene Neighboring gene T-complex protein 1 subunit epsilon pseudogene Neighboring gene ubiquitin-40S ribosomal protein S27a pseudogene Neighboring gene PHD finger protein 11-like Neighboring gene UDP-glucose glycoprotein glucosyltransferase 2 Neighboring gene DnaJ heat shock protein family (Hsp40) member C3

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450658.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables heparan sulfate 6-O-sulfotransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in heparan sulfate proteoglycan biosynthetic process, enzymatic modification IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in membrane IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
heparan-sulfate 6-O-sulfotransferase 3

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450658.1 Reference Oros_1.0 Primary Assembly

    Range
    640710..1267983 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004408719.2 → XP_004408776.1  heparan-sulfate 6-O-sulfotransferase 3

    UniProtKB/TrEMBL
    A0A2U3WJ14
    Conserved Domains (1) summary
    pfam03567
    Location:143 → 409
    Sulfotransfer_2; Sulfotransferase family
Nucleotide Protein
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