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ODC1 ornithine decarboxylase 1 [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101375756, updated on 8-Mar-2024

Summary

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Gene symbol
ODC1
Gene description
ornithine decarboxylase 1
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
11
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450411.1 (2109004..2114425)

NW_004450411.1Genomic Context describing neighboring genes Neighboring gene ATPase H+ transporting V1 subunit C2 Neighboring gene nucleolar protein 10 Neighboring gene hippocalcin like 1 Neighboring gene ribonucleotide reductase regulatory subunit M2

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450411.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ornithine decarboxylase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in putrescine biosynthetic process from ornithine IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in cytoplasm IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
ornithine decarboxylase

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450411.1 Reference Oros_1.0 Primary Assembly

    Range
    2109004..2114425
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004401791.2 → XP_004401848.1  ornithine decarboxylase

    UniProtKB/TrEMBL
    A0A2U3W1M2, A0A9B0GBY1
    Conserved Domains (2) summary
    cd00622
    Location:37 → 408
    PLPDE_III_ODC; Type III Pyridoxal 5-phosphate (PLP)-Dependent Enzyme Ornithine Decarboxylase
    COG0019
    Location:40 → 408
    LysA; Diaminopimelate decarboxylase [Amino acid transport and metabolism]
Nucleotide Protein
Heading Accession and Version

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