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LPP LIM domain containing preferred translocation partner in lipoma [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101375520, updated on 8-Mar-2024

Summary

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Gene symbol
LPP
Gene description
LIM domain containing preferred translocation partner in lipoma
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Annotation information
Annotation category: partial on reference assembly
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450945.1 (1677498..1999733, complement)

NW_004450945.1Genomic Context describing neighboring genes Neighboring gene tumor protein p63 regulated 1 Neighboring gene malate dehydrogenase, mitochondrial pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450945.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Process Evidence Code Pubs
involved_in cell-cell adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
located_in focal adhesion IEA
Inferred from Electronic Annotation
more info
 PubMed 
located_in stress fiber IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
lipoma-preferred partner

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450945.1 Reference Oros_1.0 Primary Assembly

    Range
    1677498..1999733 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004412970.2 → XP_004413027.2  lipoma-preferred partner

    UniProtKB/TrEMBL
    A0A2U3WUC8
    Conserved Domains (2) summary
    cd09350
    Location:316 → 369
    LIM1_TRIP6; The first LIM domain of Thyroid receptor-interacting protein 6 (TRIP6)
    cl02475
    Location:436 → 501
    LIM; LIM is a small protein-protein interaction domain, containing two zinc fingers
Nucleotide Protein
Heading Accession and Version

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