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CSF1R colony stimulating factor 1 receptor [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101374504, updated on 11-Apr-2024

Summary

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Gene symbol
CSF1R
Gene description
colony stimulating factor 1 receptor
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
21
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450439.1 (1856838..1886096, complement)

NW_004450439.1Genomic Context describing neighboring genes Neighboring gene solute carrier family 26 member 2 Neighboring gene tigger transposable element derived 6 Neighboring gene HMG-box containing 3 Neighboring gene platelet derived growth factor receptor beta Neighboring gene caudal type homeobox 1

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450439.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables ATP binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables cytokine binding IEA
Inferred from Electronic Annotation
more info
 PubMed 
enables macrophage colony-stimulating factor receptor activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in cell surface receptor protein tyrosine kinase signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in cytokine-mediated signaling pathway IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in multicellular organism development IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in osteoclast differentiation IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in positive regulation of kinase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
involved_in protein phosphorylation IEA
Inferred from Electronic Annotation
more info
 PubMed 
Component Evidence Code Pubs
part_of CSF1-CSF1R complex IEA
Inferred from Electronic Annotation
more info
 PubMed 
part_of receptor complex IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
macrophage colony-stimulating factor 1 receptor

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450439.1 Reference Oros_1.0 Primary Assembly

    Range
    1856838..1886096 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_004402807.1 → XP_004402864.1  macrophage colony-stimulating factor 1 receptor

    UniProtKB/TrEMBL
    A0A2U3W492
    Conserved Domains (6) summary
    smart00409
    Location:405 → 493
    IG; Immunoglobulin
    smart00410
    Location:28 → 101
    IG_like; Immunoglobulin like
    pfam00047
    Location:207 → 293
    ig; Immunoglobulin domain
    pfam07714
    Location:579 → 908
    Pkinase_Tyr; Protein tyrosine kinase
    cl11960
    Location:299 → 398
    Ig; Immunoglobulin domain
    cl21453
    Location:540 → 912
    PKc_like; Protein Kinases, catalytic domain
Nucleotide Protein
Heading Accession and Version

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