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METTL15 methyltransferase 15, mitochondrial 12S rRNA N4-cytidine [ Odobenus rosmarus divergens (Pacific walrus) ]

Gene ID: 101371911, updated on 8-Mar-2024

Summary

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Gene symbol
METTL15
Gene description
methyltransferase 15, mitochondrial 12S rRNA N4-cytidine
Gene type
protein coding
RefSeq status
MODEL
Organism
Odobenus rosmarus divergens (sub-species: divergens)
Lineage
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Laurasiatheria; Carnivora; Caniformia; Pinnipedia; Odobenidae; Odobenus
Orthologs
human mouse all
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Genomic context

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Location:
chromosome: Un
Exon count:
7
Annotation release Status Assembly Chr Location
101 current Oros_1.0 (GCF_000321225.1) Unplaced Scaffold NW_004450652.1 (1133622..1322052, complement)

NW_004450652.1Genomic Context describing neighboring genes Neighboring gene kinesin family member 18A Neighboring gene GPI mannosyltransferase 3 pseudogene

Genomic regions, transcripts, and products

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Genomic Sequence:
NW_004450652.1 Unplaced Scaffold Reference Oros_1.0 Primary Assembly

Go to nucleotide: Graphics FASTA GenBank

Bibliography

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GeneRIFs: Gene References Into Functions

General gene information

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Homology

Gene Ontology Provided by RefSeq

Function Evidence Code Pubs
enables rRNA (cytosine-N4-)-methyltransferase activity IEA
Inferred from Electronic Annotation
more info
 PubMed 
Process Evidence Code Pubs
involved_in rRNA base methylation IEA
Inferred from Electronic Annotation
more info
 PubMed 

General protein information

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Preferred Names
probable methyltransferase-like protein 15
Names
methyltransferase like 15

NCBI Reference Sequences (RefSeq)

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RefSeqs of Annotated Genomes: Odobenus rosmarus divergens Annotation Release 101 details...Open this link in a new tab

The following sections contain reference sequences that belong to a specific genome build. Explain

Reference Oros_1.0 Primary Assembly

Genomic

  1. NW_004450652.1 Reference Oros_1.0 Primary Assembly

    Range
    1133622..1322052 complement
    Download
    GenBank, FASTA, Sequence Viewer (Graphics)

mRNA and Protein(s)

  1. XM_012565339.1 → XP_012420793.1  probable methyltransferase-like protein 15 isoform X2

    Conserved Domains (1) summary
    cl17173
    Location:72 → 197
    AdoMet_MTases; S-adenosylmethionine-dependent methyltransferases (SAM or AdoMet-MTase), class I; AdoMet-MTases are enzymes that use S-adenosyl-L-methionine (SAM or AdoMet) as a substrate for methyltransfer, creating the product S-adenosyl-L-homocysteine (AdoHcy). ...

  2. XM_004408651.1 → XP_004408708.1  probable methyltransferase-like protein 15 isoform X1

    UniProtKB/TrEMBL
    A0A2U3WIS1
    Conserved Domains (1) summary
    PRK00050
    Location:72 → 407
    PRK00050; 16S rRNA m(4)C1402 methyltranserfase; Provisional
Nucleotide Protein
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Gene LinkOut

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